POPE—a tool to aid high-throughput phylogenetic analysis

Thorhildur Juliusdottir ^*, Fredrik Pettersson and Richard R. Copley

Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, OX3 7BN, UK

Abstract:

Summary: POPE (Phylogeny, Ortholog and Paralog Extractor) provides an integrated platform for automatic ortholog identification. Intermediate steps can be visualized, modified and analyzed in order to assess and improve the underlying quality of orthology and paralogy assignments.

Availability: POPE is available for download from the website: http://www.well.ox.ac.uk/~tota/pope.

Contact: tota@well.ox.ac.uk